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Simplot Science simplot recombination analysis software
Simplot Recombination Analysis Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+analysis+software+simplot/analysis+recombination/pm41754611-116-19-19
Average 86 stars, based on 1 article reviews
simplot recombination analysis software - by Bioz Stars, 2026-10
86/100 stars

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Software:

Article Title: Evolution and transmission dynamics of infectious bronchitis virus in southern China during 2018–2023: Emergence of a novel GI-19 subtype and re-emergence of GI-28
Article Snippet: .. Another recombination analysis software, Simplot version 3.5.1, was used to validate potential recombination events. ..

Article Title: Next-Generation Sequencing Reveals Continued Circulation of Rare HIV-1 Subtypes in the Democratic Republic of the Congo and Refines the Estimate of the Emergence Dates of Three Subtypes
Article Snippet: .. Specimen 146, which branched the most basal to subtype H references on this ML tree, was further analyzed by SimPlot recombination analysis software using DRC and reference subtype H sequences ( B,C). ..

Article Title: Next-Generation Sequencing Reveals Continued Circulation of Rare HIV-1 Subtypes in the Democratic Republic of the Congo and Refines the Estimate of the Emergence Dates of Three Subtypes.
Article Snippet: .. Specimen 146, which branched the most basal to subtype H references on this ML tree, was further analyzed by SimPlot recombination analysis software using DRC and reference subtype H sequences (Figure 5B,C). ..

Article Title: Genetic analysis of human adenovirus type 108 circulating in China during 2014-2024.
Article Snippet: 46 Human adenovirus type 108 (HAdV-108) has been detected in multiple countries, including China, and is 47 associated with severe acute respiratory infection (ARI) in children, with reported fatalities.. However, studies 48 on HAdV-108 remain limited.. This study aimed to investigate the clinical and genetic characteristics of HAdV49 108 in ARI children in China.

Article Title: Genome-Wide Genomic Analysis and Evolutionary Insights into Bovine Coronavirus Strains in Southwest China.
Article Snippet: .. 2025, 12, 9 6 of 18 within RDP software were further validated using the Simplot recombination analysis tool. ..

Article Title: Genome-Wide Genomic Analysis and Evolutionary Insights into Bovine Coronavirus Strains in Southwest China
Article Snippet: .. Recombinants displaying significant recombination signals within RDP software were further validated using the Simplot recombination analysis tool. ..

Article Title: Identification of a Novel Genotype of Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV) in Northern Hebei Province, China
Article Snippet: .. Further validation was performed using the recombination analysis software SimPlot V3.5.1 [ ]. .. The consistent results obtained from both RDP4 and SimPlot confirmed the accuracy and reliability of the recombination analysis.

other:

Article Title: Evolution Characterization and Pathogenicity of an NADC34-like PRRSV Isolated from Inner Mongolia, China
Article Snippet: Finally, the genomic recombination analysis was performed with SimPlot (version 3.5.1) software.

Biomarker Discovery:

Article Title: Identification of a Novel Genotype of Severe Fever with Thrombocytopenia Syndrome Virus (SFTSV) in Northern Hebei Province, China
Article Snippet: .. Further validation was performed using the recombination analysis software SimPlot V3.5.1 [ ]. .. The consistent results obtained from both RDP4 and SimPlot confirmed the accuracy and reliability of the recombination analysis.



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